experiment_type


Description

Sequences are derived from one experiment of a given type (described in the Experiment Type table) performed to analyse the biological material.

Columns

Column Type Size Nulls Auto Default Children Parents Comments
experiment_type_id serial 10 nextval('experiment_type_experiment_type_id_seq'::regclass)
sequence.experiment_type_id sequence_experiment_type_id_fkeyR
sequencing_technology varchar 2147483647 null

Platform used for the sequencing experiment

assembly_method varchar 2147483647 null

Algorithms applied to obtain the final sequence (e.g., for reads assembly, reads alignment, variant calling)

coverage int4 10 null

Number of unique reads that include a specific nucleotide in the reconstructed sequence

Indexes

Constraint Name Type Sort Column(s)
experiment_type_pkey Primary key Asc experiment_type_id

Relationships